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Full-Length Complementary DNA of Hepatitis C Virus Genome From an Infectious Blood Sample

References

  1. Harada S, Watanabe Y, Takeuchi K, Suzuki T, Katayama T, Takebe Y, Saito I, et al. Expression of processed core protein of Hepatitis C virus in mammalian cells. J Virol 1991; 65: 3015-3021
  2. Hijikata M, Kato N, Ootsuyama Y, Nakagawa M, Shimotohno K. Gene mapping of the putative structural region of the Hepatitis C virus genome by in vitro processing analysis. Proc Natl Acad Sci USA 1991; 88: 5547-5551
  3. Matsuura Y, Harada S, Suzuki R, Watanabe Y, Inoue Y, Saito I, Miyamura T. Expression of processed envelope protein of Hepatitis C virus in mammalian and insect cells. J Virol 1992; 66: 1425-1431
  4. Tomei L, Failla C, Santolini E, De-Francesco R, La-Monica N. NS3 is a serine protease required for processing of Hepatitis C virus polyprotein. J Virol 1993; 67: 4017-4026
  5. Selby MJ, Choo Q-L, Berger K, Kuo G, Glazer E, Eckart M, Lee C, et al. Expression, identification and subcellular localization of the proteins encoded by the Hepatitis C viral genome. J Gen Virol 1993; 74: 1103-1113
  6. Shimizu YK, Purcell RH, Yoshikura H. Correlation between the infectivity of Hepatitis C virus in vivo and its infectivity in vitro. Proc Natl Acad Sci U S A 1993; 90: 6037-6041
  7. Bertolini L, Iacovacci S, Ponzetto A, Gorini G, Bataglia M, Carloni G. The human bone marrow-derived B-cell line susceptible to Hepatitis C virus infection. Res Virol 1993; 144: 281-285
  8. Iacovacci S, Sargiacomo M, Parolini I, Ponzetto A, Peschle C, Carloni G. Replication and multiplication of Hepatitis C virus genome in human fetal liver cells. Res Virol 1993; 144: 275-279
  9. Lanford RE, Sureau C, Jacob JR, White R, Fuerst TR. Demonstration of in vitro infection of chimpanzee hepatocytes with Hepatitis C virus using strand-specific RT/PCR. Virology 1994; 202: 606-614
  10. Ito T, Mukaigawa J, Zuo J, Hirabayashi Y, Mitamura K, Yasui K. Cultivation of Hepatitis C virus in primary hepatocyte culture from patients with chronic Hepatitis C results in release of high titer infectious virus. J Gen Virol 1996; 77: 1043-1054
  11. Martell M, Esteban JI, Quer J, Genesca J, Weiner A, Esteban R, Guardia J, et al. Hepatitis C virus (HCV) circulates as a population of different but closely related genomes: quasispecies nature of HCV genome distribution. J Virol 1992; 66: 3225-3229
  12. Boyer JC, Haenni AL. Infectious transcripts and cDNA clones of RNA viruses. Virology 1994; 198: 415-426
  13. Kato N, Hijikata M, Ootsuyama Y, Nakagawa M, Ohkoshi S, Sugimura T, Shimotohno K. Molecular cloning of the human Hepatitis C virus genome from Japanese patients with non-A, non-B hepatitis. Proc Natl Acad Sci U S A 1990; 87: 9524-9528
  14. Takamizawa A, Mori C, Fuke I, Manabe S, Murakami S, Fujita J, Onishi E, et al. Structure and organization of the Hepatitis C virus genome isolated from human carriers. J Virol 1991; 65: 1105-1113
  15. Chen PJ, Lin MH, Tai KF, Liu PC, Lin CJ, Chen DS. The Taiwanese Hepatitis C virus genome: sequence determination and mapping the 5’termini of viral genomic and antigenomic RNA. Virology 1992; 188: 102-113
  16. Hayashi N, Higashi N, Kaminaka K, Sugimoto H, Esumi M, Komatsu K, Hayashi K, et al. Molecular cloning and heterogeneity of the human Hepatitis C virus (HCV) genome. J Hepatol 1993; 3: 94-107.
  17. Han JH, Shyamala KH, Richman KH, Brauer MJ, Irvine B, Urdea MS, Tekamp-Olson P, et al. Characterization of the terminal regions of Hepatitis C viral RNA: identification of conserved sequences in the 5′ untranslated region and poly(A) tails at the 3′ end. Proc Natl Acad Sci U S A 1991; 88: 1711-1715.
  18. Tanaka T, Kato N, Cho M-J, Shimotohno K. A novel sequence found at the 3′ terminus of Hepatitis C virus genome. Biochem Biophys Res Commun 1995; 215: 744-749.
  19. Kolykhalov AA, Feinstone SM, Rice CM. Identification of a highly conserved sequence element at the 3′ terminus of the Hepatitis C virus genome RNA. J Virol 1996; 70: 3363-3371
  20. Kubo Y, Takeuchi K, Boonmar S, Katayama T, Choo Q-L, Kuo G, Weiner AJ, et al. A cDNA fragment of Hepatitis C virus isolated from an implicated donor of post-transfusion non-A, non-B hepatitis in Japan. Nucleic Acids Res 1989; 17: 10367-10372
  21. Takeuchi K, Boonmar S, Kubo Y, Katayama T, Harada H, Ohbayashi A, Choo Q-L, et al. Hepatitis C virus cDNA clones isolated from a healthy carrier donor implicated in post-transfusion non-A, non-B hepatitis. Gene 1990; 91: 287-291
  22. Hijikata M, Shimizu YK, Kato H, Iwamoto A, Shih JW, Alter HJ, Purcell RH, et al. Equilibrium centrifugation studies of Hepatitis C virus: evidence for circulating immune complexes. J Virol 1993; 67: 1953-1958.
  23. Non-A Non-B Hepatitis Study Group of the Japanese Ministry of Health and Welfare. Chimpanzee infectious doses of the plasma from Hepatitis C patients of Japan. Acta Hepatol Jpn 1994; 35: 887-891.
  24. Kaneko S, Murakami S, Unoura M, Kobayashi K. Quantitation of Hepatitis C virus RNA by competitive polymerase chain reaction. J Med Virol 1992; 37: 278-282
  25. Okamoto H, Okada S, Sugiyama Y, Tanaka T, Sugai Y, Akahane Y, Machida A, et al. Detection of Hepatitis C virus RNA by a two-stage polymerase chain reaction with two pairs of primers deduced from the 5′-noncoding region. Jpn J Exp Med 1990; 60: 215-222.
  26. Takeuchi K, Kubo Y, Boonmar S, Watanabe Y, Katayama T, Choo Q-L, Kuo G, et al. The putative nucleocapsid and envelope protein genes of Hepatitis C virus determined by comparison of the nucleotide sequences of two isolates derived from an experimentally infected chimpanzee and healthy human carriers. J Gen Virol 1990; 71: 3027-3033.
  27. Frohman MA, Dush MK, Martin GR. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer. Proc Natl Acad Sci USA 1988; 85: 8998-9002.
  28. Harvey RJ, Darlison MG. Random-primed cDNA synthesis facilitates the isolation of multiple 5′-cDNA ends by RACE. Nucleic Acids Res 1991; 19: 4002.
  29. Edwards JB, Delort J, Mallet J. Oligodeoxyribonucleotide ligation to single-stranded cDNAs: a new tool for cloning 5′ ends of mRNAs and for constructing cDNA libraries by in vitro amplification. Nucleic Acids Res 1991; 19: 5227-5232.
  30. Gubler U, Hoffman BJ. A simple and very efficient method for generating cDNA libraries. Gene 1983; 25: 263-269.
  31. Matsuura Y, Suzuki T, Suzuki R, Sato M, Aizaki H, Saito I, Miyamura T. Processing of E1 and E2 glycoproteins of Hepatitis C virus expressed in mammalian and insect cells. Virology 1994; 205: 141-150.
  32. Gunji T, Kato N, Hijikata M, Hayashi K, Saitou S, Shimotohno K. Specific detection of positive and negative stranded Hepatitis C viral RNA using chemical RNA modification. Arch Virol 1994; 134: 293-302.
  33. Weiner AJ, Geysen HM, Christopherson C, Hall JE, Mason TJ, Saracco G, Bonino F, et al. Evidence for immune selection of HCV putative envelope glycoprotein variants: potential role in chronic Hepatitis C virus infection. Proc Natl Acad Sci USA 1992; 89: 3468-3472.
  34. Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987; 4: 406-425.
  35. Nei M, Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 1986; 3: 418-426.
  36. Thompson JD, Higgins DG, Gibson TJ. Clustal W. Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994; 22: 4673-4680.
  37. Yamada N, Tanihara K, Takada A, Yorihuzi T, Tsutsumi M, Shimomura H, Tsuji T, et al. Genetic organization and diversity of the 3′ noncoding region of the Hepatitis C virus genome. Virology 1996; 223: 255-261.
  38. Hijikata M, Mizuno K, Rikihisa T, Shimizu YK, Iwamoto A, Nakajima N, Yoshikura H. Selective transmission of Hepatitis C virus in vivo and in vitro. Arch Virol 1995; 140: 1623-1628.
  39. Inchauspe G, Zebedee S, Lee D-H, Sugitani M, Nasoff M, Prince AM. Genomic structure of the human prototype strain H of Hepatitis C virus: comparison with the American and Japanese isolates. Proc Natl Acad Sci USA 1991; 88: 10292-10296.
  40. Okamoto H, Okada S, Sugiyama Y, Kurai K, Iizuka H, Machida A, Miyakawa Y, et al. Nucleotide sequence of the genomic RNA of Hepatitis C virus isolated from a human carrier: comparison with reported isolates for conserved and divergent regions. J Gen Virol 1991; 72: 2697-2704.
  41. Choo Q-L, Richman KH, Han JH, Berger K, Lee C, Dong C, Gallegos C, et al. Genetic organization and diversity of the Hepatitis C virus. Proc Natl Acad Sci U S A 1991; 88: 2451-2455.
  42. Okamoto H, Kurai K, Okada S, Yamamoto K, Lizuka H, Tanaka T, Fukuda S, et al. Full-length sequence of a Hepatitis C virus genome having poor homology to reported isolates: comparative study of four distinct genotypes. Virology 1992; 188: 331-341.
  43. Tanaka T, Kata N, Nakagawa M, Ootsuyama Y, Cho M-J, Nakazawa T, Hijikata M, et al. Molecular cloning of Hepatitis C virus genome from a single Japanese carrier: sequence variation within the same individual and among infected individuals. Virus Res 1992; 23: 39-53.
  44. Honda M, Kaneko S, Unoura M, Kobayashi K, Murakami S. Sequence comparisons for a Hepatitis C virus genome RNA isolated from a patient with liver cirrhosis. Gene 1992; 120: 317-318.
  45. Okamoto H, Kojima M, Sakamoto M, Iizuka H, Hadiwandowo S, Suwignyo S, Miyakawa Y, et al. The entire nucleotide sequence and classification of a Hepatitis C virus isolate of a novel genotype from an Indonesian patient with chronic liver disease. J Gen Virol 1994; 75: 629-635.
  46. Sakamoto M, Akahane Y, Tsuda F, Tanaka T, Woodfield DG, Okamoto H. Entire nucleotide sequence and characterization of a Hepatitis C virus of genotype V/3a. J Gen Virol 1994; 75: 1761-1768.
  47. Chayama K, Tsubota A, Koida I, Arase Y, Saitoh S, Ikeda K, Kumada H. Nucleotide sequence of Hepatitis C virus (type 3b) isolated from a Japanese patient with chronic Hepatitis C. J Gen Virol 1994; 75: 3623-3628.
  48. Kolykhalov AA, Agapov EV, Blight KJ, Mihalik K, Feinstone SM, Rice CM. Transmission of Hepatitis C by intrahepatic inoculation with transcribed RNA. Science 1997; 277: 570-574.
  49. Rice CM, Grakoui A, Galler R, Chambers TJ. Transcription of infectious yellow fever RNA from full-length cDNA templates produced by in vitro ligation. New Biol 1989; 1: 285-296
  50. Sumiyoshi H, Hoke CH, Trent DW. Infectious Japanese encephalitis virus RNA can be synthesized from in vitro-ligated cDNA templates. J Virol 1992; 66: 5425-5431
  51. Suzuki T, Sato M, Chieda S, Shoji I, Harada T, Yamakawa Y, et al. In vivo and in vitro trans-cleavage activity of Hepatitis C virus serine proteinase expressed by recombinant baculoviruses. J Gen Virol 1995; 76: 3021-3029
  52. Shoji I, Suzuki T, Chieda S, Sato M, Harada T, Chiba T, Matsuura Y, et al. Proteolytic activity of NS3 serine proteinase of Hepatitis C virus efficiently expressed in Escherichia coli. Hepatology 1995; 22: 1648-1655
  53. Lerat H, Berby F, Trabaud M-A, Vidalin O, Major M, Trepo C, Inchauspe G. Specific detection of Hepatitis C virus minus strand RNA in hematopoietic cells. J Clin Invest 1996; 97: 845-851
  54. Yoo BJ, Selby MJ, Choe J, Suh BS, Choi SH, Joh JS, Nuovo GJ, et al. Transfection of a differentiated human hepatoma cell line (Huh7) with in vitro-transcribed Hepatitis C virus (HCV) RNA and establishment of a long-term culture persistently infected with HCV. J Virol 1995; 69: 32-38
  55. Kato N, Ootsuyama Y, Sekiya H, Ohkoshi S, Nakagawa T, Hijikata M, Shimotohno K. Genetic drift in hypervariable region 1 of the viral genome in persistent Hepatitis C virus infection. J Virol 1994; 68: 4776-4784
  56. Aizaki H, Saito A, Kusakawa I, Ashiwara Y, Nagamori S, Toda G, Suzuki T, et al. Mother-to-child transmission of a Hepatitis C virus variant with an insertional mutation in its hypervariable region. J Hepatol 1996; 25: 608-613.
  57. Zhu T, Wang N, Carr A, Nam DS, Moor-Jankowski R, Cooper DA, Ho DD. Genetic characterization of human immunodeficiency virus type 1 in blood and genital secretions: evidence for viral compartmentalization and selection during sexual transmission. J Virol 1996; 70: 3098-3107
  58. Weiner A, Erickson AL, Kansopon J, Crawford K, Muchmore E, Hughes AL, Houghton M, et al. Persistent Hepatitis C virus infection in a chimpanzee is associated with emergence of a cytotoxic T lymphocyte escape variant. Proc Natl Acad Sci U S A 1995; 92: 2755-2759.
  59. Van Doorn LJ, Capriles I, Maertens G, DeLeys R, Murray K, Kos T, Schellekens H, et al. Sequence evolution of the hypervariable region in the putative envelope region E2/NS1 of Hepatitis C virus is correlated with specific humoral immune. J Virol 1995; 69: 773-778
  60. Kojima M, Osuga T, Tsuda F, Tanaka T, Okamoto H. Influence of antibodies to the hypervariable region of E2/NS1 glycoprotein on the selective replication of Hepatitis C virus in chimpanzees. Virology 1994; 204: 665-672
  61. Wang YF, Brotman B, Andrus L, Prince AM. Immune response to epitopes of Hepatitis C virus (HCV) structural proteins in HCV-infected humans and chimpanzees. J Infect Dis 1996; 173: 808-821
  62. Abe K, Inchauspe G, Shikata T, Prince AM. Three different patterns of Hepatitis C virus infection in chimpanzees. Hepatology 1992; 15: 690-695
  63. Tanaka T, Kato N, Cho M-J, Sugiyama K, Shimotohno K. Structure of the 3′ terminus of the Hepatitis C virus genome. J Virol 1996; 70: 3307-3312.

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